- •Introduction into biochemistry
- •General properties
- •Classification of proteins
- •Simple Proteins – representatives, properties and role
- •Globulins [g]
- •Histones (h) h are basic non value proteins. Localized in nucleus with mol. Mass (mm) 10000-20000 d. They contain of 30% diaminomonocarboxylic acids and have positive charge. Their iep is equal 10.
- •Table 1 “The properties of globular simple proteins”
- •Conjugated proteins
- •Table 2 Composition of the free (transport) lipoproteins in plasma of human
- •True gp Proteoglycans
- •Table 3 Chemical nature of glycosaminoglycans
- •Nucleoproteins (np)
- •Mononucleotides
- •Table 4 The composition and names of nucleosides, nucleotides and their phosphoric derivatives
- •Structure of dna Primary st. Of dna is a spirally one polynucleotides chain (pnc), the disposition of nucleotides in which determine all hereditary properties of organism.
- •Structure of rna
- •Enzymes
- •Mechanism of enzyme action
- •Factors influencing on enzyme activity
- •Enzyme inhibition
- •Classification of enzymes
- •III. Hydrolases
- •Bioenergetics
- •Table 6 Redox potential (rp)
- •Inhibition of oxidative phosphorylation.
- •The types of oxidation
- •Peroxidase’s type
- •Vitamins
- •Vitamin b12
- •Ascorbic acid (vitamin c)
- •Rutin, vitamin p (permeability) – bioflavonoids, capillaris’s strengthening
- •Fat soluble vitamins
- •Deficiency diseases
- •Vitamin k
- •Carbohydrates metabolism. Digestion and absorption of carbohydrates. Intermediate metabolism of carbohydrates
- •Carbohydrates metabolism. Intermediate and final stages of carbohydrates metabolism
- •Lipids of food, their importance, digestion, absorption. Micelles and chylomicrons. The role of intestinal wall, liver, lungs and adipose tissue in lipid metabolism
- •Lipids metabolism. Lipoproteins, their composition and role. The pathways of usage of glycerol and free fatty acids in cells
- •“Pathologic chemistry of lipid’s metabolism”
- •The intermediate Metabolism of Simple Proteins (part 1): the conversion of amino acids in tissues. The formation and usage of Creatine. The decarboxylation of amino acids, the role of biogenic amines
- •Simple proteins metabolism. The pathways of formation and detoxification of ammonia
- •Conjugated proteins metabolism
- •Biochemistry of liver
- •Classification of hormones
- •General properties of hormones
- •Hormones of epiphysis Melatonin
- •Hypothalamic hormones
- •Vasopressin (antidiuretic hormone)
- •Oxytocin
- •Hormones of hypophysis
- •Hormones of pancreas
- •Hormones of adrenal glands
- •Sexual hormones are formed in gonads.
- •Estrogens
- •If the pregnancy beginns so development of embryo occurs; if the pregnancy doesn’t occur so degeneration of yellow body proceeds and mensis beginns again Androgens
- •Biochemistry of blood plasma
- •Table 10 a main biochemical indices in the blood plasma (serum)
- •Functions and diagnostic importance of some fractions of proteins Table 11 Biologic and clinic importance of blood serum proteins
- •Blood clotting system
- •Blood dissolution system
- •Complement system
- •Inorganic constituents of blood plasma. Water-mineral metabolism. Acidosis and alkalosis
- •Acidosis and alkalosis Table 12 Acidosis and alkalosis
- •Water metabolism
- •Biochemistry of erythrocytes
- •Metabolism in erythrocytes
- •The physiological and pathological derivatives of hemoglobin and their spectra of taking up
- •Biochemistry of white blood cells
- •Biochemistry of kidneys
- •Normal and pathologic constituents of urine. Urine analysis – its clinical significance Composition of normal urine
- •Physical examination
- •I. Volume
- •The term polyuria implies an increased volume of urine
- •II. Colour
- •III. Specific Gravity
- •Clinical significance
- •IV. Acidity and pH
- •Clinical Significance
- •V. Odor
- •Causes of abnormal odor
- •VI. Turbidity
- •Types of turbidities
- •Inorganic constituents
- •Chlorides
- •Clinical significance
- •Organic constituents
- •Clinical significance
- •II. Ammonia
- •Clinical significance
- •Increase
- •Uric acid
- •Clinical significance
- •Clinical aspect
- •Creatinine and creatine
- •Oxalic Acid
- •Clinical significance
- •Aminoacids
- •Aminoacidurias
- •Proteins
- •Proteinuria
- •Abnormal constituents
Creatinine and creatine
Normal value: the quantity of creatinine excreted in urine by normal healthy adults is from 1.2 to 1.7gms per 24hrs.
Influence of diet: the excretion depends partly upon the amount of creatinine in the diet (meat and soups), since this is excreted unchanged in the urine.
Note: the quantity excreted on a “creatinine-free diet” is practically constant for a given individual for long periods of time and is independent of total N-output.
Oxalic Acid
Normal value: normal urine contains 10-30mg of oxalic acid as oxalates per 24hrs of urine sample.
Sources of oxalates: while some oxalic acid arises from the metabolism of glycine and ascorbic acid (vit.C), the larger proportion is generally derived from the oxalates present in foods (exogenous) such as spinach, lettuce, apples, rhubarb, asparagus and other vegetables and fruits. Oxalic acid may be produced in uronic acid pathway from xylitol.
Clinical significance
oxalic acid separates from urine as insoluble “Ca-oxalate” crystals which can be seen microscopically in centrifuged deposits of urine. If passed in excessive amounts can form “ urinary calculus” (stones) in genitourinary tract.
Increase – the oxalic acid content of urine is increased – a) in Diabetes Mellitus; b) In certain liver diseases and in various conditions involving deficient tissue oxidation
Primary hyperoxaluria – a metabolic disease characterized biochemically by a continuous high urinary excretion of urinary oxalates
Aminoacids
Normal value: Small amounts of aminoacids, both free and combined, are excreted in the urine.
The free aminoacid amounts to about 1.4mg/kg for women.
Age and Sex: Normal adult women excrete more aminoacids. There is some evidence for the existence of individual patterns of aminoacids excretion. One person tends to excrete more of one aminoacid and less of another than does another person.
The sex difference does not hold for children, who excrete somewhat less than adults; infants and prematurely born babies excrete about four times as much per kg as do older children.
Growing children excrete higher levels of hydroxyproline than do adults, reflecting an increased metabolism of collagen.
Aminoacidurias
Increased excretion of aminoacids than normal.
Types – Aminoacidurias can be divided into two groups.
Over flow aminoaciduria – there is some metabolic defect, as a result there occurs an increase in plasma level of one or more aminoacids which exceeds the capacity of normal renal tubules to reabsorb them.
Renal aminoaciduria – in this the plasma concentration of aminoacids is normal but because of defects in renal tubular reabsorption of aminoacids, an increase amount of one, several or all aminoacids escape in urine.
“Overflow” Aminoacidurias
The generalised aminoaciduria found:
In severe liver diseases like acute yellow atrophy and sometime in cirrhosis liver, leucine and tyrosine are excreted in urine. Tyrosine crystallizes in sheaves or tufts of fine needls; leucine in spherical shaped crystals, yellowish in color and with radial and circular striation. Both are insoluble in acetone and ether; but soluble in acids and alkalies.
Similarly aminoacidurias occur in wasting diseases.
Metabolic defects affecting a simple aminoacid or a small group include inherited disorders like phenyl ketonuria, maple-syrup disease, histidinaemia, histidinuria etc.
Renal Aminoaciduria
The defect may be:
Specific to one reabsorption mechanism as in cystinuria, in which there is failure to reabsorb cys, lys, arg and ornithine (a common transport defect) and in Hartnup disease, in which there is failure of reabsorption of all monoamino-monocarboxylic acids.
Nonspecific: as generalised aminoaciduria seen:
In Fanconi syndrome, in which there is also failure to reabsorb glucose, phosphates, ammonia and other organic acids.
In Wilson’s disease in which in addition to aminoaciduria (Ala, Asp, Glutamic acid) there is associated glucosuria, uric acid and phosphate excretion.
An increase number of aminoacids are excreted by patients suffering from muscular dystrophies and by their mothers and siblings. Among these are Methionine or valine, Isoleucine or leucine, methionine sulfoxide or sarcosine methyl histidine.
A generalised hyperaminoaciduria commonly occurs in lead intoxication and in persons exposed to other heavy metals like Hg, Cd and Uranium. Aminoaciduria in these cases appear to be due to impaired tubular reabsorption.
More than 1.0 gm of peptides is excreted daily by the average normal human adult, which accounts for about ½ the urinary amino N2 and about 2% of total N.
Large quantities of β-amino isobutyric acid (BAIB) are excreted in the urine of a small proportion (about 5% otherwise normal people). It has also been found in various pathologic states, sometimes with other aminoacids. It is apparently due to disturbance in the metabolism of thymine and dihydrothymine, which are precursors of this aminoacid.
