- •Биологическая химия
- •060101 – Лечебное дело
- •Часть II
- •Contents
- •Cholesterol
- •I. Theoretical part
- •1. Lipids metabolism
- •1.1. Classification of lipids
- •2. Glycolipids (basically glycosphingolipids).
- •Galactosyl ceramide
- •1.2. Digestion and absorption of fats
- •Lipolysis of triglycerides in adipose tissue
- •1.3. Fatty acids oxidation
- •2. Transport of fa inside mitochondrion.
- •3 Ketocyl CoA tyolase Palmitic acid preformed rest Palmityl-CoA Acetyl-CoA
- •Oxidation of unsaturated fatty acids
- •Violations of fatty acids oxidation
- •Acetyl-CoA metabolism
- •1.4. Lipogenesis
- •Regulation of fatty acids synthesis and break down
- •1.5. Metabolism of phospholipids
- •1.6. Essencial fatty acids. Eicosanoids
- •1.7. Cholesterol metabolism
- •Distribution and functions of cholesterol
- •Cholesterol biosynthesis
- •1. Conversion of active acetate into mevalonic acid.
- •2. Squalene formation from mevalonic acid.
- •Regulation of cholesterol synthesis
- •Cholesterol esters metabolism
- •Synthesis of bile acids
- •1.8. Regulation of lipid metabolism
- •1.9. Violations of lipid metabolism
- •Violation of fats adsorption processes:
- •Test questions
- •2. Proteins metabolism
- •2.1. Pathways of proteins degradation
- •2. Digestion of proteins.
- •The selectivity of peptidases
- •2.2. Amino acids metabolism
- •The reactions of amino groups
- •Intramolecular deamination.
- •Reactions of the carboxyl group
- •2. Aminoacyladenylate formation.
- •2.3. Ammonia neutralization in the body
- •Storage and transport of ammonia
- •Fumarate pyruvate aspartate
- •2.4. Violations of nitrogen metabolism
- •2.5. Metabolism of individual amino acids
- •2. Metabolism of sulfur amino acids.
- •3. Metabolism of branched chain amino acids.
- •Leu, Ile, Val α-keto acids acyl-CoA derivatives
- •4. Metabolism of dicarboxylic amino acids
- •5. Metabolism of diaminomonocarboxylic acids.
- •6. Metabolism of phenylalanine and tyrosine.
- •7. Metabolism of tryptophan.
- •2.6. Metabolism of conjugated proteins. Chromoproteins metabolism
- •The degradation of hemoglobin in the tissues (the formation of bile pigments)
- •The hemoglobin biosynthesis
- •2.7. Nucleoproteins metabolism
- •Adenine hypoxanthine; guanine xanthine
- •The synthesis of pyrimidine nucleotides u, c, t
- •I nosine-5'-phosphate Xantosine-5'-phosphate
- •The synthesis of deoxyribonucleotides
- •Test questions
- •3. Template biosynthesis
- •3.1. Biosynthesis of nucleic acids
- •3.1.1. Dna biosynthesis (replication)
- •Synthesis of dna in the rna template
- •3.1.2. Rna biosynthesis
- •Rna synthesis in rna template
- •3.2. Protein biosynthesis
- •The properties of the genetic code
- •Preparatory stage of protein synthesis
- •3.2.1. Translation
- •1. Initiation.
- •2. Elongation.
- •3.2.2. Post-translational modification of proteins
- •Transport of synthesized proteins through membranes
- •3.2.3. Regulation of protein biosynthesis
- •3.3. Genetic engineering
- •Test questions
- •4. Hormones, nomenclature, classification
- •Test questions
- •5. Metabolic processes interaction
- •In the organism
- •Protein and carbohydrate metabolisms interconnection
- •Protein and lipid metabolisms interconnection
- •Carbohydrate and lipid metabolisms interconnection
- •Levels of homeostasis regulation
- •Changes in metabolism during starvation
- •Test questions
- •6. Mineral and water and salt metabolism
- •6.1. Water in the human body
- •6.2. Salt metabolism
- •7. Renal biochemistry. The role of the kidneys in the regulation of water and salt metabolism
- •7.1. Excretory function of the kidneys
- •7.2. Homeostatic function of the kidneys
- •7.3. Metabolic functions of the kidneys
- •7.4. Regulation of water and salt metabolism and uropoiesis
- •Test Questions
- •8. Biochemistry of nervous tissue
- •8.1. Features of metabolism of nervous tissue
- •8.2. Mechanism of nerve impulses conduction
- •Cholinergic synapses
- •Test Questions
- •9. Biochemistry of muscle tissue
- •9.1. Chemical composition of muscle tissue
- •Sources of energy for muscle work
- •9.2. Mechanism of muscle contraction and its regulation
- •9.3. Biochemical changes in muscles within pathology
- •Test Questions
- •10. Biochemistry of extracellular matrix
- •10.1. Structure of extracellular matrix
- •Collagens.
- •Fibril-forming collagens
- •Collagen, forming a tela
- •10.2. Features of metabolism of extracellular matrix Catabolism of extracellular matrix proteins
- •Reparation of damage of the extracellular matrix in norm
- •Biochemical changes of connective tissue with aging
- •The lesions of connective tissue
- •11. Blood biochemistry
- •11.1. Respiratory function of blood. Buffer systems of blood
- •11.2. Blood coagulation system. Changes in pathology
- •Extrinsic and intrinsic pathways of blood clotting
- •Test Questions
- •12. Liver biochemistry
- •12.1. Main functions of the liver
- •The role of the liver in the metabolism of carbohydrates
- •The role of liver in lipid metabolism
- •The role of the liver in the metabolism of proteins and amino acids
- •12.2. Choleresis. Pigment metabolism. Types of jaundice
- •The cleavage of hemoglobin: hemoglobinverdoglobinbiliverdinbilirubin.
- •12.3. Detoxifying liver function
- •Test Questions
- •13. Regulation of calcium and phosphorus metabolism
- •14. Bone biochemistry
- •Test Questions
- •II. Laboratory workshop Laboratory work 1. Lipid metabolism
- •Hydrolysis of milk fat by lipase
- •Test Questions
- •Laboratory work 2. Phospholipids. Cholesterol
- •4.1. Schiff reaction.
- •4.2. Salkowski reaction.
- •4.3. Lieberman-Burchard reaction.
- •Preparation of solutions of cholesterol for the calibration curve
- •Test Questions
- •Laboratory work 3. Digestion of proteins. Determination of acids of gastric contents
- •Experiment 2. Qualitative determination of free hydrochloric acid in gastric juice using indicator congo red.
- •Results of the determination of gastric acidity
- •Test Questions
- •Laboratory work 4. The end products of nitrogen metabolism
- •Test Questions
- •Laboratory work 5. Hormones
- •2.1. Biuretic reaction.
- •2.2. Millon’s reaction.
- •2.4. Geller’s test.
- •3. Qualitative reaction to thyroxine.
- •4. Qualitative reactions to the 11-dehydro-17-oxykortikosteron (cortisone).
- •4.1. The reaction with phenylhydrazine sulfate.
- •4.2. The reaction with Fehling's reagent.
- •Test Questions
- •Laboratory work 6. Mineral and water and salt metabolism
- •1.1. Determination the pH of saliva.
- •1.2. Detection of phosphates in saliva.
- •2.1. Qualitative detection of chlorides in the urine.
- •2.2. Detection of calcium in the urine.
- •2.3. Detection of phosphates in the urine.
- •The composition of mixtures for the calibration curve
- •Test Questions
- •Laboratory work 7. Urine biochemistry
- •3.1. Qualitative detection and quantitative determination of protein in the urine.
- •3.1.1. The test by boiling in weak acid environment.
- •3.1.2. The test by boiling in an acid medium in the presence of saturated sodium chloride solution.
- •3.1.3. Geller’s test.
- •3.1.4. The test with sulfosalicylic acid.
- •3.1.5. Quantitative determination of protein in the urine by the method of dilution (Brandberg - Roberts - Stolnikov method).
- •Determination of protein in the urine using dilution method
- •3.2. Semi-quantitative method for determining glucose and ketone bodies in urine using test strips.
- •3.3. Detection of blood pigments in the urine by boiling with alkali (Geller’s test).
- •Test Questions
- •Laboratory 8. Blood biochemistry
- •1. Buffer properties of blood serum.
- •2. Quantitative determination of total protein in serum according to biuretic reaction.
- •The composition of mixtures for the ployying of the calibration curve
- •3. Determination of calcium in serum by the method of de Waard.
- •Test Questions
- •Laboratory work 9. Detection of bile pigments in urine
- •Test Questions
- •Laboratory work 10. Biochemistry of bone and connective tissue
- •1. Preparation of extracts of bone and teeth tissues.
- •Test Questions
- •Bibliography
- •Biochemistry
- •In Two Parts Part II
- •392008, Г. Тамбов, ул. Советская, 190г
7. Metabolism of tryptophan.
Tryptophan is an essential amino acid. The main way of tryptophan metabolism leads to the synthesis of NAD+, reducing the need for vitamin PP. The lack of tryptophan in humans leads to a decrease in body weight, and in the case of the newborn, even a 10-day shortage of tryptophan leads to anorexia and hypoproteinemia.
Hartnup’s disease is associated with congenital malabsorption of tryptophan in the intestine and reabsorption of tryptophan and products of its metabolism in the kidney. The main manifestations are pellagra-like skin lesions, mental disorders, hyperaminoaciduria.
2.6. Metabolism of conjugated proteins. Chromoproteins metabolism
The human body contains 4.5-5.0 g of iron. The share of hemoglobin accounts for 60-70%. Changes in the synthesis or degradation of porphyrins and their complexes with proteins lead to disruption of vital functions and the development of diseases.
By using iron containing conjugative proteins in food, iron releases from complexes with proteins in the intestine and is absorbed in the form of divalent ions. Transport of iron to sites of hematopoiesis occurs in the transferrin (a glycoprotein of blood plasma). Iron combines with the protein apoferritin to form ferritin in the cells. The function of ferritin is iron storage. Most of ferritin is in the liver, spleen and bone marrow. In conjugated proteins iron is in the trivalent state.
Excess iron is not absorbed. The need for iron increases in various anemias. After digestion heme undergoes oxidation to hematin. Hematin is not absorbed in the intestine. It is excreted in unchanged form or decomposes under the action of the enzymes of the intestinal microflora.
The degradation of hemoglobin in the tissues (the formation of bile pigments)
The life span of erythrocytes is 120 days. The destruction of erythrocytes and hemoglobin degradation occur in the liver, spleen and bone marrow. The degradation of hemoglobin begins with cleavage of methylen bridge between the 1st and 2nd cycles of the porphyrin ring under the action of NADP-containing heme oxygenase. Further degradation occurs spontaneously. Biliverdin (a green pigment), CO and Fe3+ are formed.
Hemoglobin
verdoglobin
(green pigment)
biliverdin
(bile pigment)
Bilirubin
iron
globin
Bilirubin
Then bilirubin reductase reduces it to form bilirubin (a yellow pigment). Bilirubin is formed in the liver, spleen, and, apparently, erythrocytes. It enters the liver and then with the bile in the gall bladder.
Free or indirect bilirubin is insoluble in water and transported in a bond form to proteins of blood plasma. Protein pre-sedimentation with alcohol requires determining its concentration in the blood by the Ehrlich diazoreagent. The content of bilirubin in the blood is 15 micromoles per liter; about 75% is indirect bilirubin. Increasing of its concentration to 35 mmol/l leads to jaundice, an even higher level leads to severe poisoning. In the liver indirect bilirubin is neutralized by binding to UDP-glucuronic acid by the enzyme bilirubin glucuronyltransferase. Bilirubin diglucuronide is formed. It is direct bilirubin, or conjugated bilirubin. It is water soluble and gives a direct reaction with diazoreagent.
Conjugated bilirubin is always present in the bile. Direct and indirect bilirubin concentrations, as well as the relation between them in the blood is changing sharply at lesions of the liver, spleen, bone marrow, blood diseases, etc. Determination of both forms of bilirubin in the blood is important in the diagnosis of various forms of jaundice. Indirect bilirubin is found in the gallstones.
Bilirubin diglucoronide splits in the intestine by the bacteria. Bilirubin is reduced to mesobilinogen (urobilinogen, colorless), urobilin, stercobilinogen and stercobilin (brown). The main part of them are excreted in the feces (approximately 300 mg/day), about 5% is absorbed into the blood, then enter the bile or excreted in the urine (4 mg/day). Conversion of urobilin to urobilinogen takes place in light. Urobilinogen is colorless and urobilin is yellow. That is why the rich urobilin urine darkens with time.
A small amount of urobilinogen is absorbed, and then passes through the portal vein to the liver and where it is broken. Elevated level of urobilinogen in the urine is the evidence of liver disease (hepatic or hemolytic jaundice). Lack of sterkobilinogen in urine in the presence of bilirubin and biliverdin is the evidence of complete cessation of the flow bile into the intestines (blockage of the gallbladder duct or common bile duct (gallstone disease, cancerous lesions of the pancreas, etc.)).
