- •Биологическая химия
- •060101 – Лечебное дело
- •Часть II
- •Contents
- •Cholesterol
- •I. Theoretical part
- •1. Lipids metabolism
- •1.1. Classification of lipids
- •2. Glycolipids (basically glycosphingolipids).
- •Galactosyl ceramide
- •1.2. Digestion and absorption of fats
- •Lipolysis of triglycerides in adipose tissue
- •1.3. Fatty acids oxidation
- •2. Transport of fa inside mitochondrion.
- •3 Ketocyl CoA tyolase Palmitic acid preformed rest Palmityl-CoA Acetyl-CoA
- •Oxidation of unsaturated fatty acids
- •Violations of fatty acids oxidation
- •Acetyl-CoA metabolism
- •1.4. Lipogenesis
- •Regulation of fatty acids synthesis and break down
- •1.5. Metabolism of phospholipids
- •1.6. Essencial fatty acids. Eicosanoids
- •1.7. Cholesterol metabolism
- •Distribution and functions of cholesterol
- •Cholesterol biosynthesis
- •1. Conversion of active acetate into mevalonic acid.
- •2. Squalene formation from mevalonic acid.
- •Regulation of cholesterol synthesis
- •Cholesterol esters metabolism
- •Synthesis of bile acids
- •1.8. Regulation of lipid metabolism
- •1.9. Violations of lipid metabolism
- •Violation of fats adsorption processes:
- •Test questions
- •2. Proteins metabolism
- •2.1. Pathways of proteins degradation
- •2. Digestion of proteins.
- •The selectivity of peptidases
- •2.2. Amino acids metabolism
- •The reactions of amino groups
- •Intramolecular deamination.
- •Reactions of the carboxyl group
- •2. Aminoacyladenylate formation.
- •2.3. Ammonia neutralization in the body
- •Storage and transport of ammonia
- •Fumarate pyruvate aspartate
- •2.4. Violations of nitrogen metabolism
- •2.5. Metabolism of individual amino acids
- •2. Metabolism of sulfur amino acids.
- •3. Metabolism of branched chain amino acids.
- •Leu, Ile, Val α-keto acids acyl-CoA derivatives
- •4. Metabolism of dicarboxylic amino acids
- •5. Metabolism of diaminomonocarboxylic acids.
- •6. Metabolism of phenylalanine and tyrosine.
- •7. Metabolism of tryptophan.
- •2.6. Metabolism of conjugated proteins. Chromoproteins metabolism
- •The degradation of hemoglobin in the tissues (the formation of bile pigments)
- •The hemoglobin biosynthesis
- •2.7. Nucleoproteins metabolism
- •Adenine hypoxanthine; guanine xanthine
- •The synthesis of pyrimidine nucleotides u, c, t
- •I nosine-5'-phosphate Xantosine-5'-phosphate
- •The synthesis of deoxyribonucleotides
- •Test questions
- •3. Template biosynthesis
- •3.1. Biosynthesis of nucleic acids
- •3.1.1. Dna biosynthesis (replication)
- •Synthesis of dna in the rna template
- •3.1.2. Rna biosynthesis
- •Rna synthesis in rna template
- •3.2. Protein biosynthesis
- •The properties of the genetic code
- •Preparatory stage of protein synthesis
- •3.2.1. Translation
- •1. Initiation.
- •2. Elongation.
- •3.2.2. Post-translational modification of proteins
- •Transport of synthesized proteins through membranes
- •3.2.3. Regulation of protein biosynthesis
- •3.3. Genetic engineering
- •Test questions
- •4. Hormones, nomenclature, classification
- •Test questions
- •5. Metabolic processes interaction
- •In the organism
- •Protein and carbohydrate metabolisms interconnection
- •Protein and lipid metabolisms interconnection
- •Carbohydrate and lipid metabolisms interconnection
- •Levels of homeostasis regulation
- •Changes in metabolism during starvation
- •Test questions
- •6. Mineral and water and salt metabolism
- •6.1. Water in the human body
- •6.2. Salt metabolism
- •7. Renal biochemistry. The role of the kidneys in the regulation of water and salt metabolism
- •7.1. Excretory function of the kidneys
- •7.2. Homeostatic function of the kidneys
- •7.3. Metabolic functions of the kidneys
- •7.4. Regulation of water and salt metabolism and uropoiesis
- •Test Questions
- •8. Biochemistry of nervous tissue
- •8.1. Features of metabolism of nervous tissue
- •8.2. Mechanism of nerve impulses conduction
- •Cholinergic synapses
- •Test Questions
- •9. Biochemistry of muscle tissue
- •9.1. Chemical composition of muscle tissue
- •Sources of energy for muscle work
- •9.2. Mechanism of muscle contraction and its regulation
- •9.3. Biochemical changes in muscles within pathology
- •Test Questions
- •10. Biochemistry of extracellular matrix
- •10.1. Structure of extracellular matrix
- •Collagens.
- •Fibril-forming collagens
- •Collagen, forming a tela
- •10.2. Features of metabolism of extracellular matrix Catabolism of extracellular matrix proteins
- •Reparation of damage of the extracellular matrix in norm
- •Biochemical changes of connective tissue with aging
- •The lesions of connective tissue
- •11. Blood biochemistry
- •11.1. Respiratory function of blood. Buffer systems of blood
- •11.2. Blood coagulation system. Changes in pathology
- •Extrinsic and intrinsic pathways of blood clotting
- •Test Questions
- •12. Liver biochemistry
- •12.1. Main functions of the liver
- •The role of the liver in the metabolism of carbohydrates
- •The role of liver in lipid metabolism
- •The role of the liver in the metabolism of proteins and amino acids
- •12.2. Choleresis. Pigment metabolism. Types of jaundice
- •The cleavage of hemoglobin: hemoglobinverdoglobinbiliverdinbilirubin.
- •12.3. Detoxifying liver function
- •Test Questions
- •13. Regulation of calcium and phosphorus metabolism
- •14. Bone biochemistry
- •Test Questions
- •II. Laboratory workshop Laboratory work 1. Lipid metabolism
- •Hydrolysis of milk fat by lipase
- •Test Questions
- •Laboratory work 2. Phospholipids. Cholesterol
- •4.1. Schiff reaction.
- •4.2. Salkowski reaction.
- •4.3. Lieberman-Burchard reaction.
- •Preparation of solutions of cholesterol for the calibration curve
- •Test Questions
- •Laboratory work 3. Digestion of proteins. Determination of acids of gastric contents
- •Experiment 2. Qualitative determination of free hydrochloric acid in gastric juice using indicator congo red.
- •Results of the determination of gastric acidity
- •Test Questions
- •Laboratory work 4. The end products of nitrogen metabolism
- •Test Questions
- •Laboratory work 5. Hormones
- •2.1. Biuretic reaction.
- •2.2. Millon’s reaction.
- •2.4. Geller’s test.
- •3. Qualitative reaction to thyroxine.
- •4. Qualitative reactions to the 11-dehydro-17-oxykortikosteron (cortisone).
- •4.1. The reaction with phenylhydrazine sulfate.
- •4.2. The reaction with Fehling's reagent.
- •Test Questions
- •Laboratory work 6. Mineral and water and salt metabolism
- •1.1. Determination the pH of saliva.
- •1.2. Detection of phosphates in saliva.
- •2.1. Qualitative detection of chlorides in the urine.
- •2.2. Detection of calcium in the urine.
- •2.3. Detection of phosphates in the urine.
- •The composition of mixtures for the calibration curve
- •Test Questions
- •Laboratory work 7. Urine biochemistry
- •3.1. Qualitative detection and quantitative determination of protein in the urine.
- •3.1.1. The test by boiling in weak acid environment.
- •3.1.2. The test by boiling in an acid medium in the presence of saturated sodium chloride solution.
- •3.1.3. Geller’s test.
- •3.1.4. The test with sulfosalicylic acid.
- •3.1.5. Quantitative determination of protein in the urine by the method of dilution (Brandberg - Roberts - Stolnikov method).
- •Determination of protein in the urine using dilution method
- •3.2. Semi-quantitative method for determining glucose and ketone bodies in urine using test strips.
- •3.3. Detection of blood pigments in the urine by boiling with alkali (Geller’s test).
- •Test Questions
- •Laboratory 8. Blood biochemistry
- •1. Buffer properties of blood serum.
- •2. Quantitative determination of total protein in serum according to biuretic reaction.
- •The composition of mixtures for the ployying of the calibration curve
- •3. Determination of calcium in serum by the method of de Waard.
- •Test Questions
- •Laboratory work 9. Detection of bile pigments in urine
- •Test Questions
- •Laboratory work 10. Biochemistry of bone and connective tissue
- •1. Preparation of extracts of bone and teeth tissues.
- •Test Questions
- •Bibliography
- •Biochemistry
- •In Two Parts Part II
- •392008, Г. Тамбов, ул. Советская, 190г
7.2. Homeostatic function of the kidneys
The water in the body is distributed between two spaces: the intracellular and extracellular. Water distribution depends on the total amount of dissolved substances, as water moves in the direction of the osmotic gradient. Kidneys are involved in maintaining a constant amount of water by affecting the ionic composition of intra- and extracellular fluids. About 75% of sodium, chloride and water are reabsorbed from the glomerular filtrate in the proximal tubule due to the ATPase mechanism. At the same time only sodium ions are actively reabsorbed; anions move through electrochemical gradient, and water is reabsorbed passively, and isoosmotically.
Kidneys are involved in regulation of acid-base balance. Maintaining of constant pH of blood is ensured through the participation of the kidneys and blood buffer systems in this process. Blood buffer systems do not eliminate the violations of the acid-alkaline balance in the body, while regulating the pH of blood in a considerable range. The kidneys are able to provide the removal of acidic or alkaline components and thereby normalize the ratio of the components of buffer systems. The change of the pH of the blood and urine may be related to human nutrition. Because acidosis is particular dangerous for the body, there are special mechanisms in the kidneys to combat it – it is the secretion of H+, ammoniogenesis and gluconeogenesis.
H+ secretion. This mechanism involves the CO2 formation in the metabolic reactions that occurs in cells of the distal tubule. Then H2CO3 is formed under the action of carbonic anhydrase. It dissociates into H+ and HCO3 and exchanges H+ ions on Na+. Then, sodium and bicarbonate ions diffuse into the blood, providing its alkalinization.
Ammoniogenesis. Activity of ammoniagenesis enzymes in the kidneys is particularly high in acidosis. Ammoniagenesis enzymes are glutaminase and glutamate dehydrogenase:
Gluconeogenesis. It occurs in the liver and kidneys. The key enzyme of this process is kidney pyruvate carboxylase. This enzyme is the most active in the acidic environment in contrast to the same liver enzyme. Therefore, pyruvate carboxylase is activated in kidneys in acidosis. Acidreacting substances (lactate, pyruvate) are beginning to turn more rapidly into glucose, which has no acidic properties. This mechanism is important in the acidosis associated with starvation. The accumulation of ketone bodies stimulates gluconeogenesis. And it helps to improve the acid-base balance and also provides the body glucose. At full starvation, 50% of glucose is produced in the kidneys.
At alkalosis, gluconeogenesis is inhibited (pyruvate carboxylase activity is decreased as a result pH change); the secretion of protons is decreased, but glycolysis and formation of pyruvate and lactate are increased.
7.3. Metabolic functions of the kidneys
1. Formation of the vitamin D3 active form. In kidneys, the final stage of maturation of the vitamin D3 active form (1, 25-dioxycholecalciferol) is a result of microsomal oxidation. It is synthesized from cholesterol in the skin under ultraviolet rays, and then hydroxylated: first in the liver (position 25), and then in kidneys (in position 1). Thus, participating in the formation of the active form of vitamin D3, kidneys have an influence on calcium and phosphorus metabolism in the body. Therefore, in kidney diseases, osteodystrophy can be developed when the processes of vitamin D3 hydroxylation are broken.
2. Erythropoiesis regulation. Glycoprotein produced in kidneys is called the renal erythropoietic factor (erythropoietin, EPO). It is a hormone that can affect the stem cells of red bone marrow. EPO directs the development of these cells towards erythropoiesis, i.e. it stimulates the formation of red blood cells. Release rate of EPO depends on supporting the kidneys with oxygen. If the amount of incoming oxygen is reduced, it increases the production of EPO. It leads to an increase in the number of erythrocytes and improves oxygen supply. Therefore, renal anemia is sometimes observed in renal diseases.
3. Protein biosynthesis. Kidneys provide active processes of protein biosynthesis that are required to other tissues. The components of the blood coagulation system, complement system and fibrinolysis system are also synthesized here.
Renin-angiotensin-aldosterone system. Protein renin is synthesized in the cells of juxtaglomerular apparatus (JGA). It is a proteolytic enzyme that is involved in regulation of vascular tone, converting angiotensinogen to angiotensin-I by partial proteolysis. Octapeptide angiotensin-II is formed from angiotensin-I under the influence of the enzyme carboxycathepsin (also by partial proteolysis). It has a vasoconstrictor effect, but also stimulates the production of adrenal cortex hormone aldosterone. Aldosterone increases the reabsorption of sodium and water in the renal tubules. It leads to an increase in the volume of blood circulating in the blood vessels. As a result blood pressure (BP) is increased. When a molecule of angiotensin-II performs its function, it is subjected to total proteolysis by the action of the special proteases – angiotensinases.
The renin production depends on the blood supply to the kidneys. Therefore, the production of renin is increased at lower blood pressure and at higher blood pressure is decreased. In the renal pathology sometimes the increased production of renin is observed, and persistent hypertension (increased blood pressure) may be developed.
Renin-angiotensin-aldosterone system functions closely with kallikrein-kinin system (another system of regulation of vascular tone); the effect of which leads to a decrease in blood pressure.
Protein kininogen is synthesized in the kidney. Entered the blood, kininogen under the influence of serine proteases – kallikreins – becomes vasoaktive peptides kinins: bradykinin and kallidin. Bradykinin and kallidin have a vasodilating effect. They are decrease blood pressure. Inactivation of kinins occurs with the participation of carboxycathepsin. This enzyme simultaneously affects both system of regulation of vascular tone, and this influence leads to increased blood pressure. Inhibitors of carboxycathepsin are used for therapeutic purposes in treating some forms of hypertension. Participation of the kidneys in the regulation of blood pressure is also connected with the production of prostaglandins, which have a hypertensive effect.
4. Catabolism of proteins. Kidneys are involved in the catabolism of some proteins with low molecular weight (5-6 kDa), and peptides that are filtered into the primary urine. There are also hormones and other biologically active substances among these proteins. In the cells of the tubules under the influence of lysosomal proteases, these proteins and peptides are hydrolyzed to amino acids, which enter the bloodstream and be reutilized by cells of other tissues.
High costs of ATP by the kidneys are associated with the processes of active transport in the reabsorption, secretion, as well as the biosynthesis of proteins. The main way of ATP synthesis is oxidative phosphorylation. Therefore, kidney tissue needs substantial quantities of oxygen. Kidney mass is 0.5% of total body mass and oxygen consumption of kidney is 10% of the incoming oxygen.
