- •Биологическая химия
- •060101 – Лечебное дело
- •Часть II
- •Contents
- •Cholesterol
- •I. Theoretical part
- •1. Lipids metabolism
- •1.1. Classification of lipids
- •2. Glycolipids (basically glycosphingolipids).
- •Galactosyl ceramide
- •1.2. Digestion and absorption of fats
- •Lipolysis of triglycerides in adipose tissue
- •1.3. Fatty acids oxidation
- •2. Transport of fa inside mitochondrion.
- •3 Ketocyl CoA tyolase Palmitic acid preformed rest Palmityl-CoA Acetyl-CoA
- •Oxidation of unsaturated fatty acids
- •Violations of fatty acids oxidation
- •Acetyl-CoA metabolism
- •1.4. Lipogenesis
- •Regulation of fatty acids synthesis and break down
- •1.5. Metabolism of phospholipids
- •1.6. Essencial fatty acids. Eicosanoids
- •1.7. Cholesterol metabolism
- •Distribution and functions of cholesterol
- •Cholesterol biosynthesis
- •1. Conversion of active acetate into mevalonic acid.
- •2. Squalene formation from mevalonic acid.
- •Regulation of cholesterol synthesis
- •Cholesterol esters metabolism
- •Synthesis of bile acids
- •1.8. Regulation of lipid metabolism
- •1.9. Violations of lipid metabolism
- •Violation of fats adsorption processes:
- •Test questions
- •2. Proteins metabolism
- •2.1. Pathways of proteins degradation
- •2. Digestion of proteins.
- •The selectivity of peptidases
- •2.2. Amino acids metabolism
- •The reactions of amino groups
- •Intramolecular deamination.
- •Reactions of the carboxyl group
- •2. Aminoacyladenylate formation.
- •2.3. Ammonia neutralization in the body
- •Storage and transport of ammonia
- •Fumarate pyruvate aspartate
- •2.4. Violations of nitrogen metabolism
- •2.5. Metabolism of individual amino acids
- •2. Metabolism of sulfur amino acids.
- •3. Metabolism of branched chain amino acids.
- •Leu, Ile, Val α-keto acids acyl-CoA derivatives
- •4. Metabolism of dicarboxylic amino acids
- •5. Metabolism of diaminomonocarboxylic acids.
- •6. Metabolism of phenylalanine and tyrosine.
- •7. Metabolism of tryptophan.
- •2.6. Metabolism of conjugated proteins. Chromoproteins metabolism
- •The degradation of hemoglobin in the tissues (the formation of bile pigments)
- •The hemoglobin biosynthesis
- •2.7. Nucleoproteins metabolism
- •Adenine hypoxanthine; guanine xanthine
- •The synthesis of pyrimidine nucleotides u, c, t
- •I nosine-5'-phosphate Xantosine-5'-phosphate
- •The synthesis of deoxyribonucleotides
- •Test questions
- •3. Template biosynthesis
- •3.1. Biosynthesis of nucleic acids
- •3.1.1. Dna biosynthesis (replication)
- •Synthesis of dna in the rna template
- •3.1.2. Rna biosynthesis
- •Rna synthesis in rna template
- •3.2. Protein biosynthesis
- •The properties of the genetic code
- •Preparatory stage of protein synthesis
- •3.2.1. Translation
- •1. Initiation.
- •2. Elongation.
- •3.2.2. Post-translational modification of proteins
- •Transport of synthesized proteins through membranes
- •3.2.3. Regulation of protein biosynthesis
- •3.3. Genetic engineering
- •Test questions
- •4. Hormones, nomenclature, classification
- •Test questions
- •5. Metabolic processes interaction
- •In the organism
- •Protein and carbohydrate metabolisms interconnection
- •Protein and lipid metabolisms interconnection
- •Carbohydrate and lipid metabolisms interconnection
- •Levels of homeostasis regulation
- •Changes in metabolism during starvation
- •Test questions
- •6. Mineral and water and salt metabolism
- •6.1. Water in the human body
- •6.2. Salt metabolism
- •7. Renal biochemistry. The role of the kidneys in the regulation of water and salt metabolism
- •7.1. Excretory function of the kidneys
- •7.2. Homeostatic function of the kidneys
- •7.3. Metabolic functions of the kidneys
- •7.4. Regulation of water and salt metabolism and uropoiesis
- •Test Questions
- •8. Biochemistry of nervous tissue
- •8.1. Features of metabolism of nervous tissue
- •8.2. Mechanism of nerve impulses conduction
- •Cholinergic synapses
- •Test Questions
- •9. Biochemistry of muscle tissue
- •9.1. Chemical composition of muscle tissue
- •Sources of energy for muscle work
- •9.2. Mechanism of muscle contraction and its regulation
- •9.3. Biochemical changes in muscles within pathology
- •Test Questions
- •10. Biochemistry of extracellular matrix
- •10.1. Structure of extracellular matrix
- •Collagens.
- •Fibril-forming collagens
- •Collagen, forming a tela
- •10.2. Features of metabolism of extracellular matrix Catabolism of extracellular matrix proteins
- •Reparation of damage of the extracellular matrix in norm
- •Biochemical changes of connective tissue with aging
- •The lesions of connective tissue
- •11. Blood biochemistry
- •11.1. Respiratory function of blood. Buffer systems of blood
- •11.2. Blood coagulation system. Changes in pathology
- •Extrinsic and intrinsic pathways of blood clotting
- •Test Questions
- •12. Liver biochemistry
- •12.1. Main functions of the liver
- •The role of the liver in the metabolism of carbohydrates
- •The role of liver in lipid metabolism
- •The role of the liver in the metabolism of proteins and amino acids
- •12.2. Choleresis. Pigment metabolism. Types of jaundice
- •The cleavage of hemoglobin: hemoglobinverdoglobinbiliverdinbilirubin.
- •12.3. Detoxifying liver function
- •Test Questions
- •13. Regulation of calcium and phosphorus metabolism
- •14. Bone biochemistry
- •Test Questions
- •II. Laboratory workshop Laboratory work 1. Lipid metabolism
- •Hydrolysis of milk fat by lipase
- •Test Questions
- •Laboratory work 2. Phospholipids. Cholesterol
- •4.1. Schiff reaction.
- •4.2. Salkowski reaction.
- •4.3. Lieberman-Burchard reaction.
- •Preparation of solutions of cholesterol for the calibration curve
- •Test Questions
- •Laboratory work 3. Digestion of proteins. Determination of acids of gastric contents
- •Experiment 2. Qualitative determination of free hydrochloric acid in gastric juice using indicator congo red.
- •Results of the determination of gastric acidity
- •Test Questions
- •Laboratory work 4. The end products of nitrogen metabolism
- •Test Questions
- •Laboratory work 5. Hormones
- •2.1. Biuretic reaction.
- •2.2. Millon’s reaction.
- •2.4. Geller’s test.
- •3. Qualitative reaction to thyroxine.
- •4. Qualitative reactions to the 11-dehydro-17-oxykortikosteron (cortisone).
- •4.1. The reaction with phenylhydrazine sulfate.
- •4.2. The reaction with Fehling's reagent.
- •Test Questions
- •Laboratory work 6. Mineral and water and salt metabolism
- •1.1. Determination the pH of saliva.
- •1.2. Detection of phosphates in saliva.
- •2.1. Qualitative detection of chlorides in the urine.
- •2.2. Detection of calcium in the urine.
- •2.3. Detection of phosphates in the urine.
- •The composition of mixtures for the calibration curve
- •Test Questions
- •Laboratory work 7. Urine biochemistry
- •3.1. Qualitative detection and quantitative determination of protein in the urine.
- •3.1.1. The test by boiling in weak acid environment.
- •3.1.2. The test by boiling in an acid medium in the presence of saturated sodium chloride solution.
- •3.1.3. Geller’s test.
- •3.1.4. The test with sulfosalicylic acid.
- •3.1.5. Quantitative determination of protein in the urine by the method of dilution (Brandberg - Roberts - Stolnikov method).
- •Determination of protein in the urine using dilution method
- •3.2. Semi-quantitative method for determining glucose and ketone bodies in urine using test strips.
- •3.3. Detection of blood pigments in the urine by boiling with alkali (Geller’s test).
- •Test Questions
- •Laboratory 8. Blood biochemistry
- •1. Buffer properties of blood serum.
- •2. Quantitative determination of total protein in serum according to biuretic reaction.
- •The composition of mixtures for the ployying of the calibration curve
- •3. Determination of calcium in serum by the method of de Waard.
- •Test Questions
- •Laboratory work 9. Detection of bile pigments in urine
- •Test Questions
- •Laboratory work 10. Biochemistry of bone and connective tissue
- •1. Preparation of extracts of bone and teeth tissues.
- •Test Questions
- •Bibliography
- •Biochemistry
- •In Two Parts Part II
- •392008, Г. Тамбов, ул. Советская, 190г
8.2. Mechanism of nerve impulses conduction
Neurotransmitters are substances that are characterized by the following features:
are accumulated in the presynaptic membrane in sufficient concentration;
are released during the impulse transmission;
after binding to the postsynaptic membrane cause the change of the velocity of metabolic processes and the emergence of an electrical impulse;
have a system for inactivation or transport system for removing of the hydrolysis products from the synapse.
Neurotransmitters play an important role in the functioning of the nervous tissue for synaptic transmission of nerve impulses. Their synthesis occurs in the body of the neurons and the accumulation is in the specific vesicles that are slowly moving to the tips of axons with the help of the systems of neurofilament and neurotubules.
Neurotransmitters are amino acid derivatives: taurine, noradrenalin, dopamine, GABA, glycine, acetylcholine, homocysteine, and some others (adrenaline, serotonin, histamine), as well as neuropetidies.
Cholinergic synapses
Acetylcholine is synthesized from choline and acetyl-CoA. Amino acids, serine and methionine are required for the synthesis of choline. But as a rule, choline comes into the nervous tissue from the blood. Acetylcholine is involved in synaptic transmission of nerve impulses. It is accumulated in synaptic vesicles, forming complexes with negatively charged protein vesiculine. Transfer of excitation from one cell to another is done by means of a special mechanism of synaptic neurotransmission. Synapse is a functional contact of specialized sites of plasma membranes of two excitable cells. The synapse consists of a presynaptic membrane, synaptic gap and postsynaptic membrane. Membranes at the places of contact have thickenings in the form of plaques – the nerve endings. Nerve impulse, came the nerve ending, is unable to overcome the obstacle in front of it – the synaptic gap. Then electrical signal is converted to a chemical. Presynaptic membrane contains special channel proteins, such as proteins, forming the sodium channel in the membrane of the axon. They also respond to membrane potential, changing its conformation, and form a channel. As a result, the Ca ions pass through presynaptic membrane along the gradient of concentration in the nerve ending. Ca2+ concentration gradient is created by the work of the Ca2+-dependent ATPase. The increasing of concentrations of Ca2+ inside nerve endings causes fusion of vesicles available there, filled with acetylcholine. Then, acetylcholine is secreted into the synaptic gap by exocytosis and is joined to the receptor proteins, located on the surface of the postsynaptic membrane. Acetylcholine receptor is a transmembrane oligomeric glycoprotein complex composed of six subunits. The density of the location of protein receptors in the postsynaptic membrane is very high – about 20,000 molecules per 1 mcm2. The spatial structure of the receptor is in strict correspondence with the mediator conformation. In the interaction with acetylcholine receptor protein changes its conformation so that the sodium channel is formed inside it. Cation selectivity of the channel is provided by the fact that the gates of the channel are formed by negatively charged amino acids. It increases the permeability of the postsynaptic membrane for sodium and the impulse (or contraction of muscle fibers) appears. Postsynaptic membrane depolarization causes dissociation of the complex "acetylcholine - receptor protein", and acetylcholine is released into the synaptic gap. Once acetylcholine is in the synaptic gap, it is rapidly (over 40 ms) hydrolyzed by the enzyme acetyl cholinesterase in choline and acetyl-CoA.
Irreversible inhibition of acetylcholine esterase causes death. Enzyme inhibitors are organophosphorus compounds. Death occurs as a result of respiratory standstill. Reversible acetylcholine esterase inhibitors are used as therapeutic drugs, such as the treatment of glaucoma and intestinal atony.
Adrenergic synapses occur in the postganglionic fibers, in the fibers of the sympathetic nervous system, in different parts of the brain. Their mediators are catecholamines: noradrenaline and dopamine. Catecholamines are synthesized in the nervous tissue by a common mechanism of tyrosine. The key enzyme in the synthesis is tyrosine hydroxylase, inhibited by end products.
Noradrenaline is a neurotransmitter in postganglionic fibers of sympathetic system and in different parts of the CNS.
Dopamine is a neurotransmitter of pathways, the neuron bodies of which are in a brain region. Dopamine is responsible for controlling voluntary movements. Therefore in violation of dopaminergic transmission Parkinson’s disease is observed.
Catecholamines, as well as acetylcholine, are accumulated in the synaptic vesicles and also released in the synaptic gap when entering the nerve impulse. But the regulation in adrenergic receptor is different. In the presynaptic membrane there is a special regulatory protein – ahromogranin; that in response to increasing concentrations of neurotransmitter in the synaptic gap binds already liberated mediator and stops its further exocytosis. There is no enzyme that destroys a mediator in adrenergic synapses. After the transfer of impulse, the molecules of mediator are pumped through a special transport system of active transport with the participation of ATP back into the presynaptic membrane and are included again in the vesicles. In the presynaptic nerve ending the surplus mediator can be inactivated by monoamine oxidase (MAO) and catecholamine-O-methyl-transferase (COMT) by the methylation of hydroxyl groups.
Signal transmission at adrenergic synapses proceeds with the participation of adenylate cyclase system. Binding of neurotransmitter to postsynaptic receptors almost instantly causes an increased concentration of cAMP, which leads to rapid phosphorylation of proteins of the postsynaptic membrane. As a result there is a changing of generation of nerve impulses of postsynaptic membrane (inhibited). In some cases, immediate reason is the increased permeability of the postsynaptic membrane to potassium, or decreased permeability for sodium (such condition leads to hyperpolarization).
Taurine is formed from the amino acid cysteine. First, we have the oxidation of sulfur in the SH-group of the residue of sulfuric acid (the process is of a few stages), then it is followed by decarboxylation. Taurine is not the usual acid; it has no carboxyl group but has a residue of sulfuric acid. Taurine is involved in conducting nerve impulses in the process of visual perception.
GABA is an inhibitory neurotransmitter (about 40% of neurons). GABA increases the permeability of the postsynaptic membrane to potassium ions. This leads to a change in membrane potential. GABA inhibits the ban on "unnecessary" information: attention, motor control.
Glycine is an auxiliary inhibitory transmitter (less than 1% of neurons). By the caused effects it is similar to GABA. Its function is the inhibition of motor neurons.
Glutamic acid is the main excitatory neurotransmitter (about 40% of neurons). Its primary function is holding the main information flows in the central nervous system (sensory signals, motor command, and memory).
The normal activity of the CNS is provided by the delicate balance of glutamate and GABA. Violation of this balance (usually in the direction of decreasing inhibition) negatively affects many neural processes. Without a proper balance there is developing attention deficit and hyperactivity disorder in children (ADHD), nervousness and anxiety of adults are increased, sleep disturbance, insomnia, epilepsy.
Neuropeptides are composed of from three to several tens of amino acid residues. They operate only in the higher parts of the nervous system. These peptides function not only as neurotransmitters, but also as hormones. They transmit information from cell to cell in the circulation system. These include:
neurohypophyseal hormones (vasopressin, liberins, statins) – they are both hormones and transmitters;
gastrointestinal peptides (gastrin, cholecystokinin). Gastrin causes the feeling of hunger, cholecystokinin is a feeling of fullness, but also stimulates the contraction of the gallbladder and pancreatic function;
opiate peptides (peptides of anesthesia) are formed by partial proteolysis of precursor protein proopiocortin. It interacts with the same receptors as opiates (e.g. morphine), thereby simulates their action. The common name is endorphins. They are easily destroyed by proteases, so their pharmacological effect is negligible;
sleep peptides. The molecular nature is not established. They cause sleep;
memory peptides (skotofobin). They are accumulated during training on the avoidance of darkness;
peptide which are components of the renin-angiotensin system. They stimulate the thirst center and the secretion of antidiuretic hormone.
The formation of peptides occurs as a result of limited proteolysis reactions, they are destroyed under the action of proteases.
