- •Биологическая химия
- •060101 – Лечебное дело
- •Часть II
- •Contents
- •Cholesterol
- •I. Theoretical part
- •1. Lipids metabolism
- •1.1. Classification of lipids
- •2. Glycolipids (basically glycosphingolipids).
- •Galactosyl ceramide
- •1.2. Digestion and absorption of fats
- •Lipolysis of triglycerides in adipose tissue
- •1.3. Fatty acids oxidation
- •2. Transport of fa inside mitochondrion.
- •3 Ketocyl CoA tyolase Palmitic acid preformed rest Palmityl-CoA Acetyl-CoA
- •Oxidation of unsaturated fatty acids
- •Violations of fatty acids oxidation
- •Acetyl-CoA metabolism
- •1.4. Lipogenesis
- •Regulation of fatty acids synthesis and break down
- •1.5. Metabolism of phospholipids
- •1.6. Essencial fatty acids. Eicosanoids
- •1.7. Cholesterol metabolism
- •Distribution and functions of cholesterol
- •Cholesterol biosynthesis
- •1. Conversion of active acetate into mevalonic acid.
- •2. Squalene formation from mevalonic acid.
- •Regulation of cholesterol synthesis
- •Cholesterol esters metabolism
- •Synthesis of bile acids
- •1.8. Regulation of lipid metabolism
- •1.9. Violations of lipid metabolism
- •Violation of fats adsorption processes:
- •Test questions
- •2. Proteins metabolism
- •2.1. Pathways of proteins degradation
- •2. Digestion of proteins.
- •The selectivity of peptidases
- •2.2. Amino acids metabolism
- •The reactions of amino groups
- •Intramolecular deamination.
- •Reactions of the carboxyl group
- •2. Aminoacyladenylate formation.
- •2.3. Ammonia neutralization in the body
- •Storage and transport of ammonia
- •Fumarate pyruvate aspartate
- •2.4. Violations of nitrogen metabolism
- •2.5. Metabolism of individual amino acids
- •2. Metabolism of sulfur amino acids.
- •3. Metabolism of branched chain amino acids.
- •Leu, Ile, Val α-keto acids acyl-CoA derivatives
- •4. Metabolism of dicarboxylic amino acids
- •5. Metabolism of diaminomonocarboxylic acids.
- •6. Metabolism of phenylalanine and tyrosine.
- •7. Metabolism of tryptophan.
- •2.6. Metabolism of conjugated proteins. Chromoproteins metabolism
- •The degradation of hemoglobin in the tissues (the formation of bile pigments)
- •The hemoglobin biosynthesis
- •2.7. Nucleoproteins metabolism
- •Adenine hypoxanthine; guanine xanthine
- •The synthesis of pyrimidine nucleotides u, c, t
- •I nosine-5'-phosphate Xantosine-5'-phosphate
- •The synthesis of deoxyribonucleotides
- •Test questions
- •3. Template biosynthesis
- •3.1. Biosynthesis of nucleic acids
- •3.1.1. Dna biosynthesis (replication)
- •Synthesis of dna in the rna template
- •3.1.2. Rna biosynthesis
- •Rna synthesis in rna template
- •3.2. Protein biosynthesis
- •The properties of the genetic code
- •Preparatory stage of protein synthesis
- •3.2.1. Translation
- •1. Initiation.
- •2. Elongation.
- •3.2.2. Post-translational modification of proteins
- •Transport of synthesized proteins through membranes
- •3.2.3. Regulation of protein biosynthesis
- •3.3. Genetic engineering
- •Test questions
- •4. Hormones, nomenclature, classification
- •Test questions
- •5. Metabolic processes interaction
- •In the organism
- •Protein and carbohydrate metabolisms interconnection
- •Protein and lipid metabolisms interconnection
- •Carbohydrate and lipid metabolisms interconnection
- •Levels of homeostasis regulation
- •Changes in metabolism during starvation
- •Test questions
- •6. Mineral and water and salt metabolism
- •6.1. Water in the human body
- •6.2. Salt metabolism
- •7. Renal biochemistry. The role of the kidneys in the regulation of water and salt metabolism
- •7.1. Excretory function of the kidneys
- •7.2. Homeostatic function of the kidneys
- •7.3. Metabolic functions of the kidneys
- •7.4. Regulation of water and salt metabolism and uropoiesis
- •Test Questions
- •8. Biochemistry of nervous tissue
- •8.1. Features of metabolism of nervous tissue
- •8.2. Mechanism of nerve impulses conduction
- •Cholinergic synapses
- •Test Questions
- •9. Biochemistry of muscle tissue
- •9.1. Chemical composition of muscle tissue
- •Sources of energy for muscle work
- •9.2. Mechanism of muscle contraction and its regulation
- •9.3. Biochemical changes in muscles within pathology
- •Test Questions
- •10. Biochemistry of extracellular matrix
- •10.1. Structure of extracellular matrix
- •Collagens.
- •Fibril-forming collagens
- •Collagen, forming a tela
- •10.2. Features of metabolism of extracellular matrix Catabolism of extracellular matrix proteins
- •Reparation of damage of the extracellular matrix in norm
- •Biochemical changes of connective tissue with aging
- •The lesions of connective tissue
- •11. Blood biochemistry
- •11.1. Respiratory function of blood. Buffer systems of blood
- •11.2. Blood coagulation system. Changes in pathology
- •Extrinsic and intrinsic pathways of blood clotting
- •Test Questions
- •12. Liver biochemistry
- •12.1. Main functions of the liver
- •The role of the liver in the metabolism of carbohydrates
- •The role of liver in lipid metabolism
- •The role of the liver in the metabolism of proteins and amino acids
- •12.2. Choleresis. Pigment metabolism. Types of jaundice
- •The cleavage of hemoglobin: hemoglobinverdoglobinbiliverdinbilirubin.
- •12.3. Detoxifying liver function
- •Test Questions
- •13. Regulation of calcium and phosphorus metabolism
- •14. Bone biochemistry
- •Test Questions
- •II. Laboratory workshop Laboratory work 1. Lipid metabolism
- •Hydrolysis of milk fat by lipase
- •Test Questions
- •Laboratory work 2. Phospholipids. Cholesterol
- •4.1. Schiff reaction.
- •4.2. Salkowski reaction.
- •4.3. Lieberman-Burchard reaction.
- •Preparation of solutions of cholesterol for the calibration curve
- •Test Questions
- •Laboratory work 3. Digestion of proteins. Determination of acids of gastric contents
- •Experiment 2. Qualitative determination of free hydrochloric acid in gastric juice using indicator congo red.
- •Results of the determination of gastric acidity
- •Test Questions
- •Laboratory work 4. The end products of nitrogen metabolism
- •Test Questions
- •Laboratory work 5. Hormones
- •2.1. Biuretic reaction.
- •2.2. Millon’s reaction.
- •2.4. Geller’s test.
- •3. Qualitative reaction to thyroxine.
- •4. Qualitative reactions to the 11-dehydro-17-oxykortikosteron (cortisone).
- •4.1. The reaction with phenylhydrazine sulfate.
- •4.2. The reaction with Fehling's reagent.
- •Test Questions
- •Laboratory work 6. Mineral and water and salt metabolism
- •1.1. Determination the pH of saliva.
- •1.2. Detection of phosphates in saliva.
- •2.1. Qualitative detection of chlorides in the urine.
- •2.2. Detection of calcium in the urine.
- •2.3. Detection of phosphates in the urine.
- •The composition of mixtures for the calibration curve
- •Test Questions
- •Laboratory work 7. Urine biochemistry
- •3.1. Qualitative detection and quantitative determination of protein in the urine.
- •3.1.1. The test by boiling in weak acid environment.
- •3.1.2. The test by boiling in an acid medium in the presence of saturated sodium chloride solution.
- •3.1.3. Geller’s test.
- •3.1.4. The test with sulfosalicylic acid.
- •3.1.5. Quantitative determination of protein in the urine by the method of dilution (Brandberg - Roberts - Stolnikov method).
- •Determination of protein in the urine using dilution method
- •3.2. Semi-quantitative method for determining glucose and ketone bodies in urine using test strips.
- •3.3. Detection of blood pigments in the urine by boiling with alkali (Geller’s test).
- •Test Questions
- •Laboratory 8. Blood biochemistry
- •1. Buffer properties of blood serum.
- •2. Quantitative determination of total protein in serum according to biuretic reaction.
- •The composition of mixtures for the ployying of the calibration curve
- •3. Determination of calcium in serum by the method of de Waard.
- •Test Questions
- •Laboratory work 9. Detection of bile pigments in urine
- •Test Questions
- •Laboratory work 10. Biochemistry of bone and connective tissue
- •1. Preparation of extracts of bone and teeth tissues.
- •Test Questions
- •Bibliography
- •Biochemistry
- •In Two Parts Part II
- •392008, Г. Тамбов, ул. Советская, 190г
11.2. Blood coagulation system. Changes in pathology
If there is accidental damage of small blood vessels bleeding stops after a while. This is due to the formation of thrombus or a blood clot in the site of the vessel injury. This process is called blood coagulation, or hemostasis.
Currently, there is the classical enzymatic theory of blood clotting – the theory of Schmidt – Moravits. The principles of this theory are presented in the diagram (Fig. 11):
Fig. 11. The scheme of blood coagulation
Damage of the blood vessel causes a cascade of molecular processes; as a result the blood clot, or thrombus is formed, stopping leakage of blood. At the site of injury platelets are attached to the opening intercellular matrix; platelet plug is formed. Simultaneously, the system of reactions is activated leading to the conversion of soluble plasma protein fibrinogen into insoluble fibrin, which is deposited in the platelet plug, and on its surface, and the formation of thrombus occurs.
The process of blood clotting occurs in two phases.
In the first phase prothrombin turns into the active enzyme thrombin under the influence of calcium ions and thrombokinase contained in platelets and liberated from them during the destruction of platelet.
In the second phase fibrinogen is converted to fibrin under the influence of the formed thrombin.
The whole process of blood coagulation has the following phases of hemostasis:
a) the constriction of the damaged vessel;
b) the formation at the site of damage loose platelet plug, or white thrombus. Collagen of the vessel serves as a binding agent for platelets. When there is platelet aggregation vasoactive amines are released that stimulate vasoconstriction;
c) the formation of red thrombus (blood clot);
d) partial or complete dissolution of the clot.
White thrombus is formed from blood platelets and fibrin; there are relatively few red blood cells (at a high rate of blood flow). Red thrombus consists of fibrin and red blood cells (in areas of slow blood flow).
In the process of blood clotting blood coagulation factors are involved. Clotting factors associated with platelets, are denoted by Arabic numerals (1, 2, 3, etc.), and clotting factors found in blood plasma, are represented by Roman numerals.
Factor I (fibrinogen) is glycoprotein. It is synthesized in the liver.
Factor II (prothrombin) is glycoprotein. It is synthesized in the liver with the participation of vitamin K. It is able to bind calcium ions. In the hydrolytic cleavage of prothrombin active enzyme of blood clotting is formed.
Factor III (tissue factor, or tissue thromboplastin) is formed by tissue damage. It is lipoprotein.
Factor IV (Ca2 + ions) is necessary for the formation of active factor X and active tissue thromboplastin, activation of proconvertin, thrombin generation, platelet membranes labilization.
Factor V (proaccelerin) is globulin. It is the predecessor of accelerin, is synthesized in the liver.
Factor VII (prothrombinogen, proconvertin) – the predecessor of convertin. It is synthesized in the liver, with the participation of vitamin K.
Factor VIII (antihemophylic globulin A) is necessary for the formation of active factor X. Congenital lack of factor VIII is the cause of hemophilia A.
Factor IX (antihemophylic globulin B, Christmas factor) is involved in the formation of active factor X. When factor IX is in deficiency hemophilia B is developed.
Factor X (Staurt - Prower factor) is globulin. X factor is involved in the formation of thrombin from prothrombin. It is synthesized by the liver cells with the participation of vitamin K.
Factor XI (Rosenthal factor, plasma thromboplastin antecedent) is antihemophylic factor of protein nature. Failure is observed in hemophilia C.
Factor XII (Hageman factor) is involved in the starting mechanism of blood clotting. It stimulates the fibrinolytic activity and other protective reactions of the body.
Factor XIII (fibrin-stabilizing factor) is involved in the formation of intermolecular bonds in the fibrin polymer.
Factors of platelets. Currently about 10 separate factors of platelets are known. For example: Factor 1 is proaccelerin which is adsorbed on the surface of platelets. Factor 4 is antiheparin factor.
Under normal conditions, there is not thrombin in the blood, it is formed from the plasma protein prothrombin by the action of the proteolytic enzyme factor Xa (the index a denotes an active form), which is formed by loss of blood from factor X. Factor Xa converts prothrombin to thrombin only in the presence of Ca2 + and other clotting factors.
Factor III, passes into the blood plasma by tissue damage, and platelet factor 3 sets the precondition for the formation of the primer amount of thrombin from prothrombin. It catalyzes the conversion of prothrombin and proconvertin into accelerin (factor Va) and convertin (factor VIIa).
During the interaction of these factors, as well as Ca2 + ions factor Xa is formed. Then there is the formation of thrombin from prothrombin. Under the influence of thrombin two A peptides and two B peptides are cleaved from fibrinogen. Fibrinogen is converted into soluble fibrin monomer, which polymerizes rapidly to insoluble fibrin polymer, with the participation of fibrin-stabilizing factor – factor XIII (transglutaminase enzyme) in the presence of Ca2+ ions (Fig. 12).
Fig. 12. The formation of fibrin gel
Fibrin clot attached to the matrix in the site of the vessel damage with the participation of the protein fibronectin. Following the formation of fibrin fibers is their contraction, for which energy of ATP and platelet factor 8 (thrombosthenin) is required.
In people with hereditary defects of transglutaminase the blood clots as well as in healthy ones, but thrombus is fragile, that’s why secondary bleeding is possible.
Bleeding from the capillaries and small vessels has stopped during the formation of thrombocyte cork. To stop bleeding from larger vessels the rapid formation of a firm blood clot is necessary, to minimize blood loss. This is achieved by a cascade of enzymatic reactions with the mechanisms of amplification on many levels.
There are three mechanisms of enzyme activation cascade:
1. Partial proteolysis.
2. Interaction with proteins-activators.
3. Interaction with cell membranes.
Enzymes of a procoagulant path contain γ-carboxyglutamic acid. Radicals of carboxyglutamic acid form binding sites of Ca2 +. There isn’t blood coagulation in the absence of Ca2+.
