- •Биологическая химия
- •060101 – Лечебное дело
- •Часть II
- •Contents
- •Cholesterol
- •I. Theoretical part
- •1. Lipids metabolism
- •1.1. Classification of lipids
- •2. Glycolipids (basically glycosphingolipids).
- •Galactosyl ceramide
- •1.2. Digestion and absorption of fats
- •Lipolysis of triglycerides in adipose tissue
- •1.3. Fatty acids oxidation
- •2. Transport of fa inside mitochondrion.
- •3 Ketocyl CoA tyolase Palmitic acid preformed rest Palmityl-CoA Acetyl-CoA
- •Oxidation of unsaturated fatty acids
- •Violations of fatty acids oxidation
- •Acetyl-CoA metabolism
- •1.4. Lipogenesis
- •Regulation of fatty acids synthesis and break down
- •1.5. Metabolism of phospholipids
- •1.6. Essencial fatty acids. Eicosanoids
- •1.7. Cholesterol metabolism
- •Distribution and functions of cholesterol
- •Cholesterol biosynthesis
- •1. Conversion of active acetate into mevalonic acid.
- •2. Squalene formation from mevalonic acid.
- •Regulation of cholesterol synthesis
- •Cholesterol esters metabolism
- •Synthesis of bile acids
- •1.8. Regulation of lipid metabolism
- •1.9. Violations of lipid metabolism
- •Violation of fats adsorption processes:
- •Test questions
- •2. Proteins metabolism
- •2.1. Pathways of proteins degradation
- •2. Digestion of proteins.
- •The selectivity of peptidases
- •2.2. Amino acids metabolism
- •The reactions of amino groups
- •Intramolecular deamination.
- •Reactions of the carboxyl group
- •2. Aminoacyladenylate formation.
- •2.3. Ammonia neutralization in the body
- •Storage and transport of ammonia
- •Fumarate pyruvate aspartate
- •2.4. Violations of nitrogen metabolism
- •2.5. Metabolism of individual amino acids
- •2. Metabolism of sulfur amino acids.
- •3. Metabolism of branched chain amino acids.
- •Leu, Ile, Val α-keto acids acyl-CoA derivatives
- •4. Metabolism of dicarboxylic amino acids
- •5. Metabolism of diaminomonocarboxylic acids.
- •6. Metabolism of phenylalanine and tyrosine.
- •7. Metabolism of tryptophan.
- •2.6. Metabolism of conjugated proteins. Chromoproteins metabolism
- •The degradation of hemoglobin in the tissues (the formation of bile pigments)
- •The hemoglobin biosynthesis
- •2.7. Nucleoproteins metabolism
- •Adenine hypoxanthine; guanine xanthine
- •The synthesis of pyrimidine nucleotides u, c, t
- •I nosine-5'-phosphate Xantosine-5'-phosphate
- •The synthesis of deoxyribonucleotides
- •Test questions
- •3. Template biosynthesis
- •3.1. Biosynthesis of nucleic acids
- •3.1.1. Dna biosynthesis (replication)
- •Synthesis of dna in the rna template
- •3.1.2. Rna biosynthesis
- •Rna synthesis in rna template
- •3.2. Protein biosynthesis
- •The properties of the genetic code
- •Preparatory stage of protein synthesis
- •3.2.1. Translation
- •1. Initiation.
- •2. Elongation.
- •3.2.2. Post-translational modification of proteins
- •Transport of synthesized proteins through membranes
- •3.2.3. Regulation of protein biosynthesis
- •3.3. Genetic engineering
- •Test questions
- •4. Hormones, nomenclature, classification
- •Test questions
- •5. Metabolic processes interaction
- •In the organism
- •Protein and carbohydrate metabolisms interconnection
- •Protein and lipid metabolisms interconnection
- •Carbohydrate and lipid metabolisms interconnection
- •Levels of homeostasis regulation
- •Changes in metabolism during starvation
- •Test questions
- •6. Mineral and water and salt metabolism
- •6.1. Water in the human body
- •6.2. Salt metabolism
- •7. Renal biochemistry. The role of the kidneys in the regulation of water and salt metabolism
- •7.1. Excretory function of the kidneys
- •7.2. Homeostatic function of the kidneys
- •7.3. Metabolic functions of the kidneys
- •7.4. Regulation of water and salt metabolism and uropoiesis
- •Test Questions
- •8. Biochemistry of nervous tissue
- •8.1. Features of metabolism of nervous tissue
- •8.2. Mechanism of nerve impulses conduction
- •Cholinergic synapses
- •Test Questions
- •9. Biochemistry of muscle tissue
- •9.1. Chemical composition of muscle tissue
- •Sources of energy for muscle work
- •9.2. Mechanism of muscle contraction and its regulation
- •9.3. Biochemical changes in muscles within pathology
- •Test Questions
- •10. Biochemistry of extracellular matrix
- •10.1. Structure of extracellular matrix
- •Collagens.
- •Fibril-forming collagens
- •Collagen, forming a tela
- •10.2. Features of metabolism of extracellular matrix Catabolism of extracellular matrix proteins
- •Reparation of damage of the extracellular matrix in norm
- •Biochemical changes of connective tissue with aging
- •The lesions of connective tissue
- •11. Blood biochemistry
- •11.1. Respiratory function of blood. Buffer systems of blood
- •11.2. Blood coagulation system. Changes in pathology
- •Extrinsic and intrinsic pathways of blood clotting
- •Test Questions
- •12. Liver biochemistry
- •12.1. Main functions of the liver
- •The role of the liver in the metabolism of carbohydrates
- •The role of liver in lipid metabolism
- •The role of the liver in the metabolism of proteins and amino acids
- •12.2. Choleresis. Pigment metabolism. Types of jaundice
- •The cleavage of hemoglobin: hemoglobinverdoglobinbiliverdinbilirubin.
- •12.3. Detoxifying liver function
- •Test Questions
- •13. Regulation of calcium and phosphorus metabolism
- •14. Bone biochemistry
- •Test Questions
- •II. Laboratory workshop Laboratory work 1. Lipid metabolism
- •Hydrolysis of milk fat by lipase
- •Test Questions
- •Laboratory work 2. Phospholipids. Cholesterol
- •4.1. Schiff reaction.
- •4.2. Salkowski reaction.
- •4.3. Lieberman-Burchard reaction.
- •Preparation of solutions of cholesterol for the calibration curve
- •Test Questions
- •Laboratory work 3. Digestion of proteins. Determination of acids of gastric contents
- •Experiment 2. Qualitative determination of free hydrochloric acid in gastric juice using indicator congo red.
- •Results of the determination of gastric acidity
- •Test Questions
- •Laboratory work 4. The end products of nitrogen metabolism
- •Test Questions
- •Laboratory work 5. Hormones
- •2.1. Biuretic reaction.
- •2.2. Millon’s reaction.
- •2.4. Geller’s test.
- •3. Qualitative reaction to thyroxine.
- •4. Qualitative reactions to the 11-dehydro-17-oxykortikosteron (cortisone).
- •4.1. The reaction with phenylhydrazine sulfate.
- •4.2. The reaction with Fehling's reagent.
- •Test Questions
- •Laboratory work 6. Mineral and water and salt metabolism
- •1.1. Determination the pH of saliva.
- •1.2. Detection of phosphates in saliva.
- •2.1. Qualitative detection of chlorides in the urine.
- •2.2. Detection of calcium in the urine.
- •2.3. Detection of phosphates in the urine.
- •The composition of mixtures for the calibration curve
- •Test Questions
- •Laboratory work 7. Urine biochemistry
- •3.1. Qualitative detection and quantitative determination of protein in the urine.
- •3.1.1. The test by boiling in weak acid environment.
- •3.1.2. The test by boiling in an acid medium in the presence of saturated sodium chloride solution.
- •3.1.3. Geller’s test.
- •3.1.4. The test with sulfosalicylic acid.
- •3.1.5. Quantitative determination of protein in the urine by the method of dilution (Brandberg - Roberts - Stolnikov method).
- •Determination of protein in the urine using dilution method
- •3.2. Semi-quantitative method for determining glucose and ketone bodies in urine using test strips.
- •3.3. Detection of blood pigments in the urine by boiling with alkali (Geller’s test).
- •Test Questions
- •Laboratory 8. Blood biochemistry
- •1. Buffer properties of blood serum.
- •2. Quantitative determination of total protein in serum according to biuretic reaction.
- •The composition of mixtures for the ployying of the calibration curve
- •3. Determination of calcium in serum by the method of de Waard.
- •Test Questions
- •Laboratory work 9. Detection of bile pigments in urine
- •Test Questions
- •Laboratory work 10. Biochemistry of bone and connective tissue
- •1. Preparation of extracts of bone and teeth tissues.
- •Test Questions
- •Bibliography
- •Biochemistry
- •In Two Parts Part II
- •392008, Г. Тамбов, ул. Советская, 190г
12.3. Detoxifying liver function
Detoxification of substances in the liver is their chemical modification, which usually involves two phases. In the first phase a substance undergoes oxidation, reduction, hydrolysis, resulting in the formation of the -OH, -COOH, -SH, -NН2, and other groups. In the second phase some substance - glucuronic acid, sulfuric acid, glycine, glutamine, acyl residue is joined to this groups (conjugation reactions). In some cases, detoxification involves only one phase - the first or the second. Some substances are partially or completely removed without any change at all. The main role in the reactions of the first phase of detoxification belongs to microsomal enzymes (monooxygenases). The main component of the microsomal oxidation system is cytochrome P450. In the endoplasmic reticulum of hepatocytes, there are many isoforms of P450, all of which are characterized by broad substrate specificity, yet differ in specificity. They can catalyze not only hydroxylation, but also the reactions of other types. NADP • H and molecular oxygen are used in reactions.
H ydroxylation: R–Н R–ОН
E
poxidation:
R–CН=СН–R'
R–CH–CH–R'
O
Sulfoxidation: R–S–R' R–S–R'
О
Dealkylation: RОСН3 RОН + Н2С=О
RNHСН3 RNH2 + Н2С=О
Reduction of nitro compounds: RNО2 RNH2
An example of the reactions of the first phase neutralization is the hydroxylation of benzene:
benzene phenol
The most common reaction of conjugation is glucuronic acid binding with the glucuronide formation. Glucuronic acid donor is UDP-glucuronate (UDPG); the reaction is catalyzed by glucuronyl transferase - an integral protein of the endoplasmic reticulum:
In the reaction of conjugation with sulfuric acid, sulfuric acid residue donor is 3'-5-phosphoadenosine-5-phosphosulfate (PAPS, PAP-SO3Н):
The formation of conjugate with phenol (phenyl sulphate) is as follows:
In the reactions of oxidation and conjugation hydrophilic groups are formed in molecules of neutralized substances, the substance becomes more soluble in water, which facilitates its excreation from the body. In addition, chemical modification of toxic substances, tend to reduce their toxicity.
As a result of putrefactive processes occurring in the intestine, phenol and cresol are formed from tyrosine, and skatole and indole from tryptophan. These substances are absorbed and enter the liver with the bloodstream, where they are detoxified by the formation of compounds with sulfuric or glucuronic acid or, more precisely, with their active forms: PAPS and UDPG.
Aspirin (acetylsalicylic acid) is widely used as an anti-inflammatory drug. It is excreted after conjugation with glucuronic acid or glycine, as well as in the form of gentisic acid. As a result of these biochemical reactions the inactivation of drugs (e.g. benzodiazepines) usually occurs. However, some metabolites are active (cortisone metabolite cortisol, prednisone metabolite prednisolone).
Some substances (barbiturates, haloperidol) induce microsomal liver enzymes, especially cytochrome P450; other substances (chloramphenicol, allopurinol) inhibit them. Ethanol may have both effects. Simultaneous treatment of two drugs metabolized by the same microsomal enzymes, can lead to increase or decrease of the pharmacological action of one or both.
Decreased activity of microsomal enzymes can result in slower inactivation and elimination of certain drugs (phenobarbital, glucocorticoids, tetracyclines, trimethoprim) and many others. This leads to a decrease in therapeutic dose and therapeutic range.
The mechanisms responsible for the elimination of drugs can lead to the formation of hepatotoxic compounds. For example, the metabolism of acetaminophen (paracetamol) by liver enzymes leads to the formation of a high active free radical that can irreversibly inactivate many enzymes and other proteins by binding to their sulphhydryl groups. Normally, the toxic effect of this radical is prevented by the reaction with glutathione. However, at overdose of paracetamol or damage of the liver glutathione in hepatocytes is rapidly used. It can lead to inactivation of cellular proteins and extensive necrosis of hepatocytes. If there is paracetamol overdose you should quickly inject the N-acetylcysteine (NAC) - the substance rich in sulfhydryl groups.
